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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EBF1, early B-cell factor 1
Sequence ID:NM_024007
Entrez Gene ID:1879
Ensembl ID:ENSG00000164330

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 158125694 - 158526472

 Exon Info From UCSC:
NM_024007

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4524661Full LengthBC038805early B-cell factor 1
6045572Full LengthBC041178early B-cell factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076870  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024007 NP_076870 Q9UH73 TIG

Related Sequences

 
mRNAGenPeptSwissProt
AF208502 AAF19643 Q9UH73
BC038805 AAH38805 Q9UH73
BC041178 AAH41178 Q9UH73
EU446855 ABZ92384  
EU832793 ACE87804  
EU832804 ACE87815  
GQ129329 ACT64463  
GQ129403 ACT64537  
HQ257943 ADR82697  
AK289712 BAF82401 A8K0Z7
AK303698 BAG64684 B4E172
AK304438 BAG65260 B4E2U8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EBF1 NP_076870 R.norvegicus Ebf1 116543   NP_446272 100
M.musculus Ebf1 13591 Gene Info NP_031923 100
A.gambiae AgaP_AGAP011437 1278255   XP_317866 76
D.melanogaster kn 45318   NP_001097317 75
C.elegans unc-3 181573   NP_510453 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)