Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TIPIN, TIMELESS interacting protein
Sequence ID:NM_017858
Entrez Gene ID:54962
Ensembl ID:ENSG00000075131

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 66629173 - 66648992

NM_017858 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
165276662900766629518
5287346663348766633693
7357986664139766641460
7999216664165266641774
9229976664386266643937
99810766664446666644544
107712176664515266645292
121812956664897666649053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3460338Full LengthBC000870TIMELESS interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060328  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017858 NP_060328   Swi3

Related Sequences

 
mRNAGenPeptSwissProt
BC000870 AAH00870 Q9BVW5
AK000523 BAA91229 Q9BVW5
AK299233 BAG61265 B4DRF3
BK001386 DAA01365 Q9BVW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TIPIN NP_060328 M.musculus Tipin 66131 Gene Info NP_079648 77
R.norvegicus Tipin 363076   NP_001020458 77
R.norvegicus LOC100359731 100359731   XP_002730112 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)