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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCMH1, sex comb on midleg homolog 1 (Drosophila)
Sequence ID:NM_001031694
NM_001172218
NM_001172219
NM_001172220
NM_001172221
NM_001172222
NM_012236
Entrez Gene ID:22955
Ensembl ID:ENSG00000010803

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 41492876 - 41707788

 Exon Info From UCSC:
NM_001031694
NM_001172218
NM_001172219
NM_001172220
NM_001172221
NM_001172222
NM_012236

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3010273Full LengthBC009752sex comb on midleg homolog 1 (Drosophila)
3355251Full LengthBC021252sex comb on midleg homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036368  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001031694 NP_001026864 Q96GD3  
NM_001172218 NP_001165689    
NM_001172219 NP_001165690    
NM_001172220 NP_001165691    
NM_001172221 NP_001165692    
NM_001172222 NP_001165693    
NM_012236 NP_036368   SAM_1
MBT
SAM_2

Related Sequences

 
mRNAGenPeptSwissProt
AF149045 AAF01150 Q96GD3
AF149046 AAF01151 Q96GD3
BC009752 AAH09752 Q96GD3
BC021252 AAH21252 Q96GD3
DQ892667 ABM83593  
DQ895911 ABM86837  
AK023124 BAG51159 B3KMZ7
AK299383 BAG61370 Q96GD3
AK301497 BAG63008 B4DWE6
BX640721 CAE45840 Q96GD3
CR457161 CAG33442 Q96GD3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCMH1 NP_001026864 M.musculus Scmh1 29871 Gene Info NP_038911 94
R.norvegicus Scmh1 362581   NP_001103139 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)