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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACAT2, Acetyl-CoA acetyltransferase 2
Sequence ID:NM_005891
RefSeqGene ID:NG_023389
Entrez Gene ID:39
Ensembl ID:ENSG00000120437

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 160183098 - 160200082

NM_005891 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1186160182988160183173
187321160183950160184084
322503160188036160188217
504621160189542160189659
622765160196201160196344
766888160197181160197303
8891043160198333160198487
10441154160199201160199311
11551549160199690160200084

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823036Full LengthBC000408acetyl-Coenzyme A acetyltransferase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005882  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005891 NP_005882 Q9BWD1 EC 2.3.1.9 Thiolase_N
Thiolase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S70154 AAB30856 Q9BWD1 EC 2.3.1.9
BC000408 AAH00408 Q9BWD1 EC 2.3.1.9
AF356877 AAM00223 Q9BWD1 EC 2.3.1.9
HQ448187 ADQ32668    
AB208993 BAD92230 Q59GW6  
AK291080 BAF83769 A8K4W5  
AK294273 BAH11719 B7Z233  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACAT2 NP_005882 R.norvegicus Acat3 308100   NP_001006996 87
D.melanogaster CG9149 38147   NP_612094 58
A.gambiae AgaP_AGAP001318 1281861   XP_321828 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)