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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PDGFC, platelet derived growth factor C
Sequence ID:NM_016205
NR_036641
Entrez Gene ID:56034
Ensembl ID:ENSG00000145431

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 157683793 - 157892381

NM_016205 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11595157682763157684357
15961813157688924157689141
18142021157693837157694044
20222202157731988157732168
22032398157771372157771567
23993007157891937157892545

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020652Full LengthBC136662platelet derived growth factor C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057289  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016205 NP_057289 Q9NRA1 CUB

Related Sequences

 
mRNAGenPeptSwissProt
AF091434 AAF00049 Q9NRA1
AF244813 AAF80597 Q9NRA1
BC136662 AAI36663 Q9NRA1
AF260738 AAK51637 Q9NRA1
AY358493 AAQ88857 Q9NRA1
AB033831 BAB03266 Q9NRA1
AK313817 BAG36553 B2R9K6
AK300480 BAG62196 B4DU34
AK304638 BAG65417 B4E3A5
AM922296 CAP58278 B4DU34

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDGFC NP_057289 M.musculus Pdgfc 54635 Gene Info NP_064355 87
R.norvegicus Pdgfc 79429   NP_112607 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)