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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DESI1, Desumoylating isopeptidase 1
Sequence ID:NM_015704
Entrez Gene ID:27351
Ensembl ID:ENSG00000100418

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 41996879 - 42017020

NM_015704 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12594199693541997193
2603824199926241999384
3834924200004742000156
4935624200326542003334
5635844200384342003864
5857454201675542016915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939801Full LengthBC093956PPPDE peptidase domain containing 2
8327647Full LengthBC112179PPPDE peptidase domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056519  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015704 NP_056519 Q6ICB0 DUF862

Related Sequences

 
mRNAGenPeptSwissProt
BC093956 AAH93956 Q6ICB0
BC112179 AAI12180 Q6ICB0
CR456458 CAG30344 Q6ICB0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPPDE2 NP_056519 M.musculus Pppde2 28075 Gene Info NP_598856 97
R.norvegicus Pppde2 315160   NP_001020874 97
A.thaliana AT3G07090 819895   NP_187365 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)