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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MAVS, mitochondrial antiviral signaling protein
Sequence ID:NM_001206491
NM_020746
NR_037921
RefSeqGene ID:NG_030028
Entrez Gene ID:57506
Ensembl ID:ENSG00000088888

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 3835204 - 3849280

Transcript StartTranscript EndChromosomal Start Chromosomal End
110238274483827549
10328638352043835387
28746138382813838455
46263438419783842150
63579438429003843059
795132738449023845434
13281175938463293856760

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5751684Full LengthBC044952virus-induced signaling adapter

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206491 NP_001193420    
NM_020746 NP_065797 Q7Z434  

Related Sequences

 
mRNAGenPeptSwissProt
BC044952 AAH44952 Q7Z434
DQ174270 AAZ80417 Q7Z434
DQ181928 ABA19229 Q7Z434
DQ167126 ABA54890 Q7Z434
EF467323 ABR24161 B2BD33
EF467324 ABR24162 B2BD34
EU832581 ACE86983  
EU832500 ACE87672  
AB033097 BAA86585 Q7Z434
AK023799 BAB14684 Q7Z434
AB097003 BAC77356 Q7Z434
AK130992 BAC85473 Q7Z434
AK123956 BAC85734 Q7Z434
AB232371 BAE79738 Q7Z434
AK291785 BAF84474 A8K6X0
AK296897 BAG59455 B2BD34

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAVS NP_065797 M.musculus Mavs 228607 Gene Info NP_659137 55
R.norvegicus Mavs 311430   NP_001005556 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)