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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COL4A3, collagen, type IV, alpha 3 (Goodpasture antigen)
Sequence ID:NM_000091
NM_031362
NM_031363
NM_031364
NM_031365
NM_031366
RefSeqGene ID:NG_011591
Entrez Gene ID:1285
Ensembl ID:ENSG00000169031

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ALPORT SYNDROME, AUTOSOMAL DOMINANT 
ALPORT SYNDROME, AUTOSOMAL RECESSIVECOL4A4
HEMATURIA,BENIGN FAMILIAL 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q36-q37Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 228172448 - 228176586


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062473BC156138collagen, type IV, alpha 3 (Goodpasture antigen)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000082  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000091 NP_000082 Q01955 Collagen
C4

Related Sequences

 
mRNAGenPeptSwissProt
U02519 AAA18942 Q01955
U02520 AAA18943 Q01955
M92993 AAA21610 Q01955
M81379 AAA51556 Q01955
S55790 AAB19637 Q01955
AF258351 AAF72632 Q01955
BC156138 AAI56139 Q01955
EU268882 ABX71213 A9QVI3
X80031 CAA56335 Q01955

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COL4A3 NP_000082 M.musculus Col4a3 12828 Gene Info NP_031760 79
R.norvegicus Col4a3 363265   NP_001129231 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta