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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RFNG, RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Sequence ID:NM_002917
Entrez Gene ID:5986
Ensembl ID:ENSG00000169733

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80005777 - 80008431

NM_002917 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
29068000577880006682
9079928000690680006991
99311588000755280007717
115912478000779380007881
124814018000827780008430
140215048000853780008639
150515538000916980009217
155418288000937580009649

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860343Full LengthBC146805RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
4850415IncompleteBC014495radical fringe homolog (Drosophila)
5588638IncompleteBC050399radical fringe homolog (Drosophila)
6295914IncompleteBC069034radical fringe homolog (Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002917 NP_002908 Q9Y644 EC 2.4.1.222  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U94353 AAC51359 Q9Y644 EC 2.4.1.222
BC146805 AAI46806 A6H8Z0  
AK094016 BAC04269 Q8N9R1  
AK293568 BAG57039 B4DEC8  
AK302068 BAG63458 B4DXP6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RFNG NP_002908 M.musculus Rfng 19719 Gene Info NP_033079 84
D.melanogaster fng 40314   NP_524191 49
A.gambiae AgaP_AGAP006439 1277047   XP_316475 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)