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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AMIGO3, adhesion molecule with Ig-like domain 3
Sequence ID:NM_198722
RefSeqGene ID:NG_011603
Entrez Gene ID:386724
Ensembl ID:ENSG00000176020

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49755383 - 49756898

NM_198722 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3830084975426749757237

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5211193Full LengthBC110418adhesion molecule with Ig-like domain 3
40025738Full LengthBC101363adhesion molecule with Ig-like domain 3
40025739Full LengthBC101364adhesion molecule with Ig-like domain 3
40025741Full LengthBC101365adhesion molecule with Ig-like domain 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_942015  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198722 NP_942015 Q86WK7 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC101363 AAI01364 Q86WK7
BC101364 AAI01365 Q86WK7
BC101365 AAI01366 Q494V5
BC110418 AAI10419  
AY237003 AAO48944 Q86WK7
AY358134 AAQ88501 Q86WK7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AMIGO3 NP_942015 R.norvegicus Amigo3 316003   NP_835280 80
M.musculus Amigo3 320844 Gene Info NP_796249 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)