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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRIM71, tripartite motif containing 71, E3 ubiquitin protein ligase
Sequence ID:NM_001039111
Entrez Gene ID:131405
Ensembl ID:ENSG00000206557

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 32859509 - 32933771

NM_001039111 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19153285950932860423
91610833291530932915476
108412183292742532927559
121931373293185132933769

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063307Full LengthBC157052tripartite motif-containing 71
100062428BC156152tripartite motif-containing 71

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039111 NP_001034200 Q2Q1W2  

Related Sequences

 
mRNAGenPeptSwissProt
BC156152 AAI56153  
BC157052 AAI57053  
DQ232881 ABB18374 Q2Q1W2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM71 NP_001034200 R.norvegicus Trim71 301042   XP_236676 95
M.musculus Trim71 636931 Gene Info NP_001035968 94
C.elegans lin-41 172760   NP_001020999 40
A.gambiae AgaP_AGAP005125 1274803   XP_314006 36
D.melanogaster wech 44653   NP_001137614 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)