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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ISX, Intestine-specific homeobox
Sequence ID:NM_001008494
Entrez Gene ID:91464
Ensembl ID:ENSG00000175329

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 35463014 - 35481751

NM_001008494 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111803546212935463308
118113323547851035478661
133314493548037535480491
145033813548144635483377

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322685Full LengthBC113633intestine-specific homeobox
8327680Full LengthBC112212intestine-specific homeobox

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008494  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008494 NP_001008494 Q2M1V0 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC112212 AAI12213 Q2M1V0
BC113633 AAI13634 Q2M1V0
EU832389 ACE86874 Q2M1V0
EU832305 ACE87562  
HQ258132 ADR82886  
AB219123 BAG12059 B1B1S6
CR749372 CAH18225 Q2M1V0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ISX NP_001008494 M.musculus Isx 71597 Gene Info NP_082113 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)