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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. TET1, tet methylcytosine dioxygenase 1
Sequence ID:NM_030625
Entrez Gene ID:80312
Ensembl ID:ENSG00000138336

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 70406689 - 70454238

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069059Full LengthBC172365tet oncogene 1
6514657IncompleteBC053905tet oncogene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_085128  

Protein Infomation

NM_030625 NP_085128 Q8NFU7 EC 1.14.11.n2 zf-CXXC

Related Sequences

BC053905 AAH53905 Q8NFU7 EC 1.14.11.n2
BC172365 AAI72365 Q8NFU7 EC 1.14.11.n2
AF430147 AAM88301 Q8NFU7 EC 1.14.11.n2
AB051463 BAB21767 Q8NFU7 EC 1.14.11.n2
AL713658 CAD28467 Q8NFU7 EC 1.14.11.n2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens TET1 NP_085128 R.norvegicus Tet1 309902   NP_001101113 66
M.musculus Tet1 52463 Gene Info NP_081660 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)