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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCYOX1, prenylcysteine oxidase 1
Sequence ID:NM_016297
Entrez Gene ID:51449
Ensembl ID:ENSG00000116005

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 70485292 - 70507217

NM_016297 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11787048523070485407
1793857048649170486697
3865607048834370488517
5617727050209070502301
7739257050264570502797
92653767050386570508315

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5207140Full LengthBC033815prenylcysteine oxidase 1
5773815Full LengthBC051891prenylcysteine oxidase 1
3933577IncompleteBC007029prenylcysteine oxidase 1
4663864IncompleteBC022259prenylcysteine oxidase 1

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016297 NP_057381 Q9UHG3 EC 1.8.3.5  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF181490 AAF16937 Q9UHG3 EC 1.8.3.5
BC007029 AAH07029 Q9UHG3 EC 1.8.3.5
BC033815 AAH33815 Q9UHG3 EC 1.8.3.5
BC051891 AAH51891 Q9UHG3 EC 1.8.3.5
AY359063 AAQ89422 Q9UHG3 EC 1.8.3.5
DQ890801 ABM81727    
DQ893956 ABM84882    
AB020715 BAA74931 Q9UHG3 EC 1.8.3.5
AK314453 BAG37061 Q9UHG3 EC 1.8.3.5
AK296478 BAH12368 B7Z3Y2  
AK303043 BAH13888 B7Z8A2  
AK316013 BAH14384 B7Z9P8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCYOX1 NP_057381 M.musculus Pcyox1 66881 Gene Info NP_080099 79
R.norvegicus Pcyox1 246302   NP_659553 78
A.thaliana FCLY 836512   NP_201196 38
N.crassa NCU09710 3875087   XP_958949 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)