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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. YBX2, Y box binding protein 2
Sequence ID:NM_015982
Entrez Gene ID:51087
Ensembl ID:ENSG00000006047

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 7191581 - 7197874

NM_015982 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2441571915707191961
41650571920677192156
50670171928487193043
70280571932867193389
806109071935697193853
1091118071944117194500
1181121471953447195377
1215127871967937196856
1279160671975487197875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5171696Full LengthBC033800Y box binding protein 2
5742121Full LengthBC047760Y box binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057066  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015982 NP_057066 Q9Y2T7 CSD

Related Sequences

 
mRNAGenPeptSwissProt
AF096834 AAD30662 Q9Y2T7
BC033800 AAH33800 Q9Y2T7
BC047760 AAH47760 Q9Y2T7
AB208818 BAD92055 Q59HE1
AK315035 BAG37519 B2RCC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens YBX2 NP_057066 R.norvegicus Ybx2 303250   XP_220618 92
M.musculus Ybx2 53422 Gene Info NP_058571 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)