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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NPC1L1, NPC1-like 1
Sequence ID:NM_001101648
NM_013389
RefSeqGene ID:NG_013088
Entrez Gene ID:29881
Ensembl ID:ENSG00000015520

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 44552134 - 44580914

 Exon Info From UCSC:
NM_001101648
NM_013389

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052270Full LengthBC143756NPC1 (Niemann-Pick disease, type C1, gene)-like 1
40125729Full LengthBC117178NPC1 (Niemann-Pick disease, type C1, gene)-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037521  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001101648 NP_001095118    
NM_013389 NP_037521 Q9UHC9 Patched

Related Sequences

 
mRNAGenPeptSwissProt
AF192522 AAF20396 Q9UHC9
AF192523 AAF20397 Q9UHC9
BC117178 AAI17179 Q9UHC9
BC143756 AAI43757 B7ZLE6
AY437865 AAR97886 Q9UHC9
AY515256 AAS56939 Q9UHC9
FJ481111 ACL18055 Q9UHC9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NPC1L1 NP_037521 M.musculus Npc1l1 237636 Gene Info NP_997125 77
C.elegans ncr-1 180719   NP_508771 30
C.elegans ncr-2 176165   NP_498813 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)