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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FAM13B, family with sequence similarity 13, member B
Sequence ID:NM_001101800
NM_001101801
NM_016603
Entrez Gene ID:51306
Ensembl ID:ENSG00000031003

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137273608 - 137281658

 Exon Info From UCSC:
NM_001101800
NM_001101801
NM_016603

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5265611Full LengthBC048965family with sequence similarity 13, member B
6148274Full LengthBC056887family with sequence similarity 13, member B
5272612IncompleteBC041335chromosome 5 open reading frame 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057687  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001101800 NP_001095270    
NM_001101801 NP_001095271    
NM_016603 NP_057687 Q9NYF5 RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
AF251038 AAF63764 Q9NYF5
AF157316 AAF67482 Q9NYF5
BC048965 AAH48965 Q9NYF5
BC056887 AAH56887 Q9NYF5
EU832212 ACE86782  
EU832118 ACE87468  
AK314224 BAG36896 B2RAJ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FAM13B NP_057687 M.musculus Fam13b 225358 Gene Info NP_666196 87
R.norvegicus Fam13b 291694   NP_001099628 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)