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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MGAT4B, Mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
Sequence ID:NM_054013
NM_014275
Entrez Gene ID:11282
Ensembl ID:ENSG00000161013

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 179225009 - 179233625

 Exon Info From UCSC:
NM_054013
NM_014275

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6196058Full LengthBC051835mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
3608546IncompleteBC009464mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_463459  NP_055090  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014275 NP_055090 Q9UQ53 EC 2.4.1.145 Glyco_transf_54
NM_054013 NP_463459     Glyco_transf_54

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009464 AAH09464 Q9UQ53 EC 2.4.1.145
BC051835 AAH51835 Q9UQ53 EC 2.4.1.145
AY358984 AAQ89343 Q9UQ53 EC 2.4.1.145
AB000624 BAA83464 Q9UQ53 EC 2.4.1.145
AK023137 BAG51162 Q9UQ53 EC 2.4.1.145
AL162067 CAB82404 Q9UQ53 EC 2.4.1.145

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MGAT4B NP_055090 M.musculus Mgat4b 103534 Gene Info NP_666038 99
R.norvegicus Mgat4b 303100   NP_001121005 99
A.gambiae AgaP_AGAP012440 1274144   XP_313212 50
D.melanogaster CG9384 39608   NP_648720 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)