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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRRC17, Leucine rich repeat containing 17
Sequence ID:NM_005824
NM_001031692
Entrez Gene ID:10234
Ensembl ID:ENSG00000128606

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 102553446 - 102585540

 Exon Info From UCSC:
NM_005824
NM_001031692

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5229061Full LengthBC027903leucine rich repeat containing 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005815  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001031692 NP_001026862 Q8N6Y2  
NM_005824 NP_005815   LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
U32907 AAB41565 Q8N6Y2
BC027903 AAH27903 Q8N6Y2
AY358889 AAQ89248 Q8N6Y2
EU832399 ACE86884  
EU832314 ACE87571  
AK290305 BAF82994 A8K2P0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRRC17 NP_001026862 M.musculus Lrrc17 74511 Gene Info NP_083253 89
R.norvegicus Lrrc17 502715   NP_001020326 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)