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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. XRCC4, X-ray repair complementing defective repair in Chinese hamster cells 4
Sequence ID:NM_003401
NM_022406
NM_022550
Entrez Gene ID:7518
Ensembl ID:ENSG00000152422

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 82373450 - 82649157

 Exon Info From UCSC:
NM_003401
NM_022406
NM_022550

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3838919Full LengthBC005259X-ray repair complementing defective repair in Chinese hamster cells 4
4108822Full LengthBC016314X-ray repair complementing defective repair in Chinese hamster cells 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003392  NP_071801  NP_072044  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003401 NP_003392   XRCC4
NM_022406 NP_071801 Q13426 XRCC4
NM_022550 NP_072044   XRCC4

Related Sequences

 
mRNAGenPeptSwissProt
U40622 AAC50339 Q13426
BC005259 AAH05259 Q13426
BC010655 AAH10655 Q7Z763
BC016314 AAH16314 Q13426
BT007216 AAP35880 Q13426
EU832713 ACE87045  
AB017445 BAB20668 Q13426
AK290739 BAF83428 Q13426

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XRCC4 NP_071801 M.musculus Xrcc4 108138 Gene Info NP_082288 76
R.norvegicus Xrcc4 309995   NP_001007000 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)