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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ERCC4, excision repair cross-complementing rodent repair deficiency, complementation group 4
Sequence ID:NM_005236
RefSeqGene ID:NG_011442
Entrez Gene ID:2072
Ensembl ID:ENSG00000175595

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
XERODERMA PIGMENTOSUM, GROUP F 
XFE PROGEROID SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 14014014 - 14042367

 Exon Info From UCSC:
NM_005236

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064134Full LengthBC160102excision repair cross-complementing rodent repair deficiency, complementation group 4
4732192IncompleteBC020741excision repair cross-complementing rodent repair deficiency, complementation group 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005227  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005236 NP_005227 Q92889 ERCC4

Related Sequences

 
mRNAGenPeptSwissProt
U64315 AAB07689 Q92889
BC020741 AAH20741 A0PJA9
BC142631 AAI42632 A5PKV6
BC160102 AAI60102  
AK289726 BAF82415 Q92889
AK301930 BAG63350 B4DXD8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ERCC4 NP_005227 R.norvegicus Ercc4 304719   XP_222534 87
M.musculus Ercc4 50505 Gene Info NP_056584 86
A.gambiae AgaP_AGAP002805 1273157   XP_563334 43
D.melanogaster mei-9 31373   NP_525068 43
N.crassa NCU07440 3880767   XP_964627 41
A.thaliana UVH1 834117   NP_198931 39
S.pombe rad16 2538760   NP_587855 37
S.cerevisiae RAD1 856085   NP_015303 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)