Skip Navigation
National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SHROOM2, Shroom family member 2
Sequence ID:NM_001649
RefSeqGene ID:NG_012493
Entrez Gene ID:357
Ensembl ID:ENSG00000146950

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 9880722 - 9917476

NM_001649 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125597544959754749
25640798416919841842
40853998590169859147
540288098623979864737
2881298198662299866329
2982367799002149900909
3678422999051739905724
4230440199072349907405
4402467499126809912952
4675744599147109917480

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021734Full LengthBC140866shroom family member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001649 NP_001640 Q13796 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC140866 AAI40867 Q13796
AK096596 BAG53335 B3KU73
AK299907 BAH13168 B7Z682
X83543 CAA58534 Q13796
CR749271 CAH18127 Q68DU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SHROOM2 NP_001640 M.musculus Shroom2 110380 Gene Info NP_766029 63
R.norvegicus Shroom2 317435   NP_001041358 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)