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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RRP1B, ribosomal RNA processing 1 homolog B (S. cerevisiae)
Sequence ID:NM_015056
Entrez Gene ID:23076
Ensembl ID:ENSG00000160208

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 45079468 - 45113330

 Exon Info From UCSC:
NM_015056

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4821672Full LengthBC028386ribosomal RNA processing 1 homolog B (S. cerevisiae)
3839957IncompleteBC014005ribosomal RNA processing 1 homolog B (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055871  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015056 NP_055871 Q14684 Nop52

Related Sequences

 
mRNAGenPeptSwissProt
BC014005 AAH14005 Q6PJM8
BC028386 AAH28386 Q14684
D80001 BAA11496 Q14684

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RRP1B NP_055871 R.norvegicus Rrp1b 309673   XP_228076 66
M.musculus Rrp1b 72462 Gene Info NP_082520 65
A.thaliana AT5G20600 832182   NP_197560 30
C.elegans C47E12.7 177853   NP_501798 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)