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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SELM, Selenoprotein M
Sequence ID:NM_080430
Entrez Gene ID:140606
Ensembl ID:ENSG00000198832

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 31500930 - 31503567

NM_080430 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
514003150076431501113
4014793150119331501271
4805143150164331501677
5155503150191531501950
5517393150336231503550

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3890282Full LengthBC013421selenoprotein M
4184342Full LengthBC030236selenoprotein M
6058758Full LengthBC068004selenoprotein M
5732110IncompleteBC053846selenoprotein M

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080430 NP_536355 Q8WWX9  

Related Sequences

 
mRNAGenPeptSwissProt
BC013421 AAH13421 Q8WWX9
BC030236 AAH30236 Q8WWX9
BC068004 AAH68004 Q8WWX9
AY043487 AAK95397 Q8WWX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SELM NP_536355 M.musculus Selm 114679 Gene Info NP_444497 83
R.norvegicus Selm 498398   NP_001108485 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)