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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSMA3, proteasome (prosome, macropain) subunit, alpha type, 3
Sequence ID:NM_002788
NM_152132
NR_038123
Entrez Gene ID:5684
Ensembl ID:ENSG00000100567

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 58711573 - 58738613

 Exon Info From UCSC:
NM_002788
NM_152132

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3996256Full LengthBC005265proteasome (prosome, macropain) subunit, alpha type, 3
4104773Full LengthBC029402proteasome (prosome, macropain) subunit, alpha type, 3
6018899Full LengthBC038990proteasome (prosome, macropain) subunit, alpha type, 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002779  NP_687033  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002788 NP_002779 P25788 EC 3.4.25.1 Proteasome
NM_152132 NP_687033     Proteasome

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC005265 AAH05265 P25788 EC 3.4.25.1
BC029402 AAH29402 P25788 EC 3.4.25.1
BC038990 AAH38990 P25788 EC 3.4.25.1
BT006711 AAP35357 P25788 EC 3.4.25.1
BT019715 AAV38520 P25788 EC 3.4.25.1
DQ892645 ABM83571    
DQ895883 ABM86809    
D00762 BAA00659 P25788 EC 3.4.25.1
AK315158 BAG37603 P25788 EC 3.4.25.1
CR456933 CAG33214 Q6IB71  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMA3 NP_002779 M.musculus Psma3 19167 Gene Info NP_035314 99
R.norvegicus Psma3l 408248   NP_001004094 99
R.norvegicus Psma3 29670   NP_058976 99
A.thaliana PAG1 817244   NP_180270 62
D.melanogaster Prosalpha7 36018   NP_724834 58
A.gambiae AgaP_AGAP001973 1281150   XP_321089 57
N.crassa NCU02493 3881228   XP_965087 54
S.cerevisiae PRE10 854544   NP_015007 52
S.pombe pre10 2539378   NP_588040 50
C.elegans pas-7 174571   NP_496177 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)