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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SECTM1, secreted and transmembrane 1
Sequence ID:NM_003004
Entrez Gene ID:6398
Ensembl ID:ENSG00000141574

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80279123 - 80291614

NM_003004 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
213478027890080280245
134814818028075380280886
148217908028245780282765
179119368028502280285167
193722828029157580291920

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4413387Full LengthBC017716secreted and transmembrane 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003004 NP_002995 Q8WVN6  

Related Sequences

 
mRNAGenPeptSwissProt
U77643 AAC52044 Q8WVN6
BC017716 AAH17716 Q8WVN6
EU831892 ACE86651  
EU831815 ACE87333  
JF432651 ADZ15868  
AK223068 BAD96788 Q53G63
AK223104 BAD96824 Q53G27
AK290708 BAF83397 A8K3U3
AK312980 BAG35817 Q8WVN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SECTM1 NP_002995 R.norvegicus Sectm1 287885   NP_001013061 55
M.musculus Sectm1a 209588 Gene Info NP_663348 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)