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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OXSM, 3-oxoacyl-ACP synthase, mitochondrial
Sequence ID:NM_001145391
NM_017897
NR_026937
Entrez Gene ID:54995
Ensembl ID:ENSG00000151093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 25831570 - 25836025

 Exon Info From UCSC:
NM_001145391
NM_017897

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3446492Full LengthBC0082023-oxoacyl-ACP synthase, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060367  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001145391 NP_001138863      
NM_017897 NP_060367 Q9NWU1 EC 2.3.1.41 ketoacyl-synt
Ketoacyl-synt_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008202 AAH08202 Q9NWU1 EC 2.3.1.41
JF432169 ADZ15386    
AK000611 BAA91286 Q9NWU1 EC 2.3.1.41
AK304821 BAG65569 B4E3Q7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OXSM NP_060367 R.norvegicus Oxsm 289934   NP_001093978 86
M.musculus Oxsm 71147 Gene Info NP_081971 85
A.gambiae AgaP_AGAP002809 1273152   XP_312104 56
D.melanogaster CG12170 40692   NP_649565 55
A.thaliana AT2G04540 814996   NP_178533 54
N.crassa NCU00056 3871946   XP_955799 52
S.pombe SPBC887.13c 2541226   NP_596487 51
S.cerevisiae CEM1 856790   NP_010983 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)