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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EIF3D, Eukaryotic translation initiation factor 3, subunit D
Sequence ID:NM_003753
Entrez Gene ID:8664
Ensembl ID:ENSG00000100353

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 36906901 - 36925192

 Exon Info From UCSC:
NM_003753

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822380Full LengthBC000328eukaryotic translation initiation factor 3, subunit D
2822489Full LengthBC080515eukaryotic translation initiation factor 3, subunit D
2961048Full LengthBC000469eukaryotic translation initiation factor 3, subunit D
3915705Full LengthBC014912eukaryotic translation initiation factor 3, subunit D
6527393Full LengthBC093100eukaryotic translation initiation factor 3, subunit D
7939531Full LengthBC093686eukaryotic translation initiation factor 3, subunit D
8068983Full LengthBC101477eukaryotic translation initiation factor 3, subunit D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003744  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003753 NP_003744 O15371 eIF-3_zeta

Related Sequences

 
mRNAGenPeptSwissProt
U54558 AAD03466 O15371
BC000328 AAH00328 O15371
BC000469 AAH00469 O15371
BC014912 AAH14912 O15371
BC080515 AAH80515 O15371
BC093100 AAH93100 O15371
BC093686 AAH93686 O15371
BC101477 AAI01478 O15371
BT007381 AAP36045 O15371
DQ891129 ABM82055  
DQ894308 ABM85234  
AK312939 BAG35781 O15371
AK300199 BAG61970 A8MWD3
AK301284 BAG62843 B4DVY1
AK303884 BAG64820 B4E1K8
CR456489 CAG30375 O15371
CU013049 CAK54480  
CU013337 CAK54779  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EIF3D NP_003744 M.musculus Eif3d 55944 Gene Info NP_061219 99
R.norvegicus Eif3d 362952   NP_001004283 99
A.gambiae EIF3D_ANOGA 1273630   XP_312631 61
D.melanogaster eIF-3p66 42789   NP_524463 59
A.thaliana AT4G20980 827845   NP_001031683 46
C.elegans eif-3.D 176268   NP_498984 46
S.pombe moe1 2543412   NP_594625 45
A.thaliana AT5G44320 834457   NP_199245 44
N.crassa NCU07380 3875011   XP_958873 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)