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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APOBEC2, apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
Sequence ID:NM_006789
Entrez Gene ID:10930
Ensembl ID:ENSG00000124701

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 41032103 - 41032630

NM_006789 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12784102093941021216
2798434102906641029630
84416334103183941032628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6202939Full LengthBC047767apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
7262555Full LengthBC069688apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
7262567Full LengthBC069764apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006780  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006789 NP_006780 Q9Y235 APOBEC_C
APOBEC_N

Related Sequences

 
mRNAGenPeptSwissProt
AF161698 AAD45360 Q9Y235
BC047767 AAH47767 Q9Y235
BC069688 AAH69688 Q9Y235
BC069764 AAH69764 Q9Y235
AK223461 BAD97181 Q9Y235
AK313288 BAG36096 Q9Y235
AK300689 BAG62372 B4DUL0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APOBEC2 NP_006780 R.norvegicus Apobec2 301226   NP_001100353 92
M.musculus Apobec2 11811 Gene Info NP_033824 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)