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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TOX4, TOX high mobility group box family member 4
Sequence ID:NM_014828
RefSeqGene ID:NG_001332
Entrez Gene ID:9878
Ensembl ID:ENSG00000092203

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 21945405 - 21967040

NM_014828 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11092194533421945442
1101782194565421945722
1794212195560921955851
4226822195674821957008
6839132195733121957561
9149942196045421960534
99517442196066621961415
174519082196338721963550
190945222196470321967316

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3880134Full LengthBC013689TOX high mobility group box family member 4
4721305IncompleteBC020727TOX high mobility group box family member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055643  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014828 NP_055643 O94842 HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
BC013689 AAH13689 O94842
AY305872 AAQ95214 Q5J9I5
EU446865 ABZ92394  
EU831869 ACE86628  
EU831791 ACE87309  
AB018280 BAA34457 O94842
AK295913 BAG58701 B4DJ39
AK298555 BAG60750 B4DPY8
AK299807 BAG61682 B4DSM0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TOX4 NP_055643 M.musculus Tox4 268741 Gene Info NP_075923 95
R.norvegicus Tox4 286990   NP_775446 95
A.gambiae AgaP_AGAP000281 1271977   XP_310839 56
D.melanogaster CG12104 38187   NP_647629 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)