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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KRT25, keratin 25
Sequence ID:NM_181534
RefSeqGene ID:NG_012414
Entrez Gene ID:147183
Ensembl ID:ENSG00000204897

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 38904272 - 38911565

NM_181534 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
353993890427338904637
4004673890550938905576
4686853890663138906848
6868113890720538907330
8129733890741638907577
97411303891011138910267
113112133891063738910719
121417033891109438911583

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015007Full LengthBC146488keratin 25
100014440BC140408keratin 25

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_853512  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181534 NP_853512 Q7Z3Z0 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC140408 AAI40409  
BC146488 AAI46489  
AK129503 BAC85169 Q6ZPD6
AJ564204 CAD91904 Q7Z3Z0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT25 NP_853512 M.musculus Krt25 70810 Gene Info NP_598491 92
R.norvegicus Krt25 303519   NP_001008822 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)