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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OR52L1, Olfactory receptor, family 52, subfamily L, member 1
Sequence ID:NM_001005173
Entrez Gene ID:338751
Ensembl ID:ENSG00000183313

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6007121 - 6008215

NM_001005173 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1109460071216008214

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021341Full LengthBC137343olfactory receptor, family 52, subfamily L, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005173  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005173 NP_001005173 Q8NGH7 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC137343 AAI37344 Q8NGH7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OR52L1 NP_001005173 R.norvegicus Olr196 293338   NP_001000187 87
R.norvegicus Olr194 405293   NP_001000948 87
M.musculus Olfr685 258160 Gene Info NP_001011857 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)