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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GFI1B, growth factor independent 1B transcription repressor
Sequence ID:NM_001135031
NM_004188
Entrez Gene ID:8328
Ensembl ID:ENSG00000165702

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 135862065 - 135866437

 Exon Info From UCSC:
NM_001135031
NM_004188

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5170920Full LengthBC043371growth factor independent 1B transcription repressor
5204065IncompleteBC048254growth factor independent 1B (potential regulator of CDKN1A, translocated in CML)
5205687IncompleteBC035626growth factor independent 1B (potential regulator of CDKN1A, translocated in CML)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004179  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135031 NP_001128503    
NM_004188 NP_004179 Q5VTD9 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF081946 AAD08672 Q5VTD9
BC043371 AAH43371 Q5VTD9
AY428733 AAR06639 Q5VTD9
CR536546 CAG38783 Q5VTD9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GFI1B NP_004179 R.norvegicus Gfi1b 311832   NP_001101293 86
M.musculus Gfi1b 14582 Gene Info NP_032140 85
A.gambiae AgaP_AGAP009699 1279085   XP_318755 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)