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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNC1, potassium voltage-gated channel, Shaw-related subfamily, member 1
Sequence ID:NM_001112741
NM_004976
Entrez Gene ID:3746
Ensembl ID:ENSG00000129159

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 17800718 - 17804602

 Exon Info From UCSC:
NM_001112741
NM_004976

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40024733Full LengthBC107129potassium voltage-gated channel, Shaw-related subfamily, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004967  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001112741 NP_001106212    
NM_004976 NP_004967 P48547 Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
M96747 AAA59458 P48547
S56770 AAB25764 P48547
BC107129 AAI07130 Q3KNS8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNC1 NP_001106212 R.norvegicus Kcnc1 25327   NP_036988 100
M.musculus Kcnc1 16502 Gene Info NP_001106210 100
A.gambiae AgaP_AGAP008201 1277770   XP_317267 52
C.elegans egl-36 181269   NP_509795 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)