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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCND1, potassium voltage-gated channel, Shal-related subfamily, member 1
Sequence ID:NM_004979
RefSeqGene ID:NG_012515
Entrez Gene ID:3750
Ensembl ID:ENSG00000102057

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48819061 - 48827976

NM_004979 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114294881863848820066
143016804882246148822711
168117794882298448823082
178018634882316748823250
186420264882335048823512
202747204882555748828250

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5271042Full LengthBC045659potassium voltage-gated channel, Shal-related subfamily, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004970  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004979 NP_004970 Q9NSA2 Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
AF166003 AAF65516 Q9NSA2
BC045659 AAH45659 Q9NSA2
AB021865 BAA96454 Q9NSA2
AK315092 BAG37557 Q9NSA2
AK094431 BAG52865 A6NEF1
AJ005898 CAA06755 Q9NSA2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCND1 NP_004970 M.musculus Kcnd1 16506 Gene Info NP_032449 95
R.norvegicus Kcnd1 116695   NP_001099218 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)