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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LCT, lactase
Sequence ID:NM_002299
RefSeqGene ID:NG_008104
Entrez Gene ID:3938
Ensembl ID:ENSG00000115850

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LACTASE DEFICIENCY, CONGENITAL 
LACTASE PERSISTANCE/NONPERSISTANCEMCM6

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 136545414 - 136594750

 Exon Info From UCSC:
NM_002299

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063642Full LengthBC156950lactase
100062309BC156075lactase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002290  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002299 NP_002290 P09848 EC 3.2.1.62
EC 3.2.1.108
Glyco_hydro_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC156075 AAI56076    
BC156950 AAI56951    
X07994 CAA30801 P09848 EC 3.2.1.62
EC 3.2.1.108

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LCT NP_002290 M.musculus Lct 226413 Gene Info NP_001074547 80
R.norvegicus Lct 116569   NP_446293 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)