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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC4A9, solute carrier family 4, sodium bicarbonate cotransporter, member 9
Sequence ID:NM_001258426
NM_001258427
NM_001258428
NM_031467
RefSeqGene ID:NG_032676
Entrez Gene ID:83697
Ensembl ID:ENSG00000113073

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 139739827 - 139754595


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020249Full LengthBC136262solute carrier family 4, sodium bicarbonate cotransporter, member 9
9052115Full LengthBC143602solute carrier family 4, sodium bicarbonate cotransporter, member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113655  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001258426 NP_001245355    
NM_001258427 NP_001245356    
NM_001258428 NP_001245357 Q96Q91  
NM_031467 NP_113655   HCO3_cotransp
Band_3_cyto

Related Sequences

 
mRNAGenPeptSwissProt
BC136262 AAI36263 B7ZL63
BC143602 AAI43603 B7ZL63
AF336237 AAK16733 Q96Q91
AF313465 AAK28832 Q96Q91
AF332961 AAK69625 Q96Q91
AB032762 BAA93010 Q96Q91

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC4A9 NP_113655 R.norvegicus Slc4a9 266612   NP_690921 83
M.musculus Slc4a9 240215 Gene Info NP_766418 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)