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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXC6, homeobox C6
Sequence ID:NM_004503
NM_153693
RefSeqGene ID:NG_029818
Entrez Gene ID:3223
Ensembl ID:ENSG00000197757

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54410956 - 54423746

 Exon Info From UCSC:
NM_004503
NM_153693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915223Full LengthBC074845homeobox C6
30915460Full LengthBC074844homeobox C6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705897  NP_061826  NP_710160  NP_055435  NP_004494  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004503 NP_004494   Homeobox
NM_014620 NP_055435 P09017 Homeobox
NM_018953 NP_061826 Q00444 Homeobox
NM_153633 NP_705897   Homeobox
NM_153693 NP_710160   Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
M16938 AAA36007 P09630
S82986 AAB46892 P09630
BC050442 AAH50442 Q86TF7
BC074844 AAH74844 P09630
BC074845 AAH74845 P09630
BC140272 AAI40273  
BC141643 AAI41644  
EU446482 ABZ92011  
HQ448564 ADQ33042  
AK314829 BAG37349 P09630
X07495 CAA30376 P09017
X52402 CAA36647 Q14543
CR456954 CAG33235 Q6IB50

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXC6 NP_004494 M.musculus Hoxc6 15425 Gene Info NP_034595 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)