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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB43, RAB43, member RAS oncogene family
Sequence ID:NM_001204883
NM_001204884
NM_001204885
NM_001204886
NM_001204887
NM_001204888
NM_198490
Entrez Gene ID:339122
Ensembl ID:ENSG00000172780

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 128806417 - 128840457

Transcript StartTranscript EndChromosomal Start Chromosomal End
13772128806417128810188
37733956128813828128814011
39574447128840128128840618

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4873224Full LengthBC062319RAB43, member RAS oncogene family
4874664IncompleteBC073812RAB43, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940892  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204883 NP_001191812    
NM_001204884 NP_001191813    
NM_001204885 NP_001191814    
NM_001204886 NP_001191815    
NM_001204887 NP_001191816    
NM_001204888 NP_001191817    
NM_198490 NP_940892 Q86YS6 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC062319 AAH62319 Q86YS6
AY166852 AAO17291 Q86YS6
AK291014 BAF83703 Q86YS6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB43 NP_001191812 R.norvegicus Rab43 500249   NP_001019502 93
M.musculus Rab43 69834 Gene Info NP_001034483 92
A.gambiae AgaP_AGAP007096 1270007   XP_308662 62
D.melanogaster Rab-RP3 38930   NP_523970 57
C.elegans rab-19 178301   NP_502576 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)