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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H3A, histone cluster 1, H3a
Sequence ID:NM_003529
Entrez Gene ID:8350
Ensembl ID:ENSG00000198366

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26020717 - 26021182

NM_003529 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14692602071726021185

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7002068Full LengthBC066245histone cluster 1, H3a
7002069Full LengthBC066246histone cluster 1, H3a
7002070Full LengthBC066247histone cluster 1, H3a
7002071Full LengthBC067490histone cluster 1, H3a
7002072Full LengthBC067491histone cluster 1, H3a
7262697Full LengthBC069303histone cluster 1, H3a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003520  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003529 NP_003520 P68431 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC066245 AAH66245 P68431
BC066246 AAH66246 P68431
BC066247 AAH66247 P68431
BC067490 AAH67490 P68431
BC067491 AAH67491 P68431
BC069303 AAH69303 P68431
HQ448409 ADQ32889  
CR541858 CAG46656 P68431

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H3A NP_003520 H.sapiens HIST1H3F 8968 Gene Info NP_066298 100
H.sapiens HIST1H3D 8351 Gene Info NP_003521 100
H.sapiens HIST1H3B 8358 Gene Info NP_003528 100
H.sapiens HIST1H3H 8357 Gene Info NP_003527 100
H.sapiens HIST1H3C 8352 Gene Info NP_003522 100
H.sapiens HIST1H3J 8356 Gene Info NP_003526 100
H.sapiens HIST1H3I 8354 Gene Info NP_003524 100
H.sapiens HIST1H3G 8355 Gene Info NP_003525 100
H.sapiens HIST1H3E 8353 Gene Info NP_003523 100
M.musculus Hist1h3h 319152 Gene Info NP_835513 100
M.musculus Hist1h3g 97908 Gene Info NP_659539 100
M.musculus Hist1h3i 319153 Gene Info NP_835514 100
M.musculus Hist1h3a 360198 Gene Info NP_038578 100
R.norvegicus LOC679994 679994   XP_001055231 100
R.norvegicus LOC680511 680511   XP_001057500 100
A.thaliana AT4G40040 830165   NP_849529 96
A.thaliana AT4G40030 830164   NP_001078516 96
A.thaliana AT5G10980 830965   NP_196659 96
P.falciparum PFF0510w 3885920   XP_966093 93
P.falciparum PFF0865w 3885798   XP_966164 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)