Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCL17, chemokine (C-C motif) ligand 17
Sequence ID:NM_002987
Entrez Gene ID:6361
Ensembl ID:ENSG00000102970

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 57438678 - 57449974

NM_002987 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1705743867857438747
711995744778557447913
2003175744899257449109
3186155744967657449973

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7216923Full LengthBC069107chemokine (C-C motif) ligand 17
8327534Full LengthBC112066chemokine (C-C motif) ligand 17
8327536Full LengthBC112068chemokine (C-C motif) ligand 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002978  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002987 NP_002978 Q92583 IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC069107 AAH69107 Q92583
BC112066 AAI12067 Q92583
BC112068 AAI12069 Q92583
D43767 BAA07824 Q92583

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL17 NP_002978 R.norvegicus Ccl17 117518   NP_476492 66
M.musculus Ccl17 20295 Gene Info NP_035462 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)