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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPS27A, ribosomal protein S27a
Sequence ID:NM_001135592
RefSeqGene ID:NG_017017
Entrez Gene ID:6233
Ensembl ID:ENSG00000143947

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p16Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 55459823 - 55462745

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3050927Full LengthBC001392ribosomal protein S27a
4831143Full LengthBC042362ribosomal protein S27a
5531043Full LengthBC053371ribosomal protein S27a
30336950Full LengthBC066293ribosomal protein S27a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002945  

Protein Infomation

NM_001135592 NP_001129064    
NM_001177413 NP_001170884    
NM_002954 NP_002945 P62979 ubiquitin

Related Sequences

M10939 AAA36788 P62979
S79522 AAB21188 P62979
BC001392 AAH01392 P62979
BC042362 AAH42362 Q49A90
BC053371 AAH53371 Q5RKT7
BC066293 AAH66293 P62979
HQ448720 ADQ33198  
AB362574 BAF81539 A8CGI2
AK315695 BAG38058 B2RDW1
X63237 CAA44911 P62979

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens RPS27A NP_001129064 M.musculus Gm8430 667035   XP_001002242 99
R.norvegicus RGD1564290 498837   XP_574121 94
D.melanogaster RpS27A 34420   NP_476778 91
A.thaliana UBQ6 819323   NP_566095 86
N.crassa NCU04553 3872092   XP_955944 86
A.thaliana UBQ5 825398   NP_191784 85
S.pombe ubi3 2541445   NP_594108 85
S.pombe SPAC589.10c 2542138   NP_594058 85
S.cerevisiae RPS31 850864   NP_013268 83
A.thaliana AT1G23410 838949   NP_173755 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)