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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPS3, ribosomal protein S3
Sequence ID:NM_001005
Entrez Gene ID:6188
Ensembl ID:ENSG00000149273

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.3-q13.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 75110598 - 75116731

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2906158Full LengthBC003137ribosomal protein S3
4665438Full LengthBC034149ribosomal protein S3
6160514Full LengthBC100284ribosomal protein S3
6297012Full LengthBC071917ribosomal protein S3
3544292IncompleteBC003577ribosomal protein S3
4347401IncompleteBC013196ribosomal protein S3
40134452IncompleteBC150501ribosomal protein S3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000996  

Protein Infomation

NM_001005 NP_000996 P23396 Ribosomal_S3_C
NM_001256802 NP_001243731    
NM_001260506 NP_001247435    
NM_001260507 NP_001247436    

Related Sequences

S42658 AAB19349 P23396
U14990 AAB60336 P23396
U14991 AAB60337 P23396
U14992 AAB60338 P23396
BC003137 AAH03137 P23396
BC003577 AAH03577 P23396
BC013196 AAH13196 P23396
BC034149 AAH34149 P23396
BC071917 AAH71917 P23396
BC100284 AAI00285 P23396
BC150501 AAI50502 A7E2S3
DQ892888 ABM83814  
DQ896136 ABM87135  
D28344 BAA05710  
AB062288 BAB93471 P23396
AK223048 BAD96768 Q53G83
AK313051 BAG35882 P23396
X55715 CAA39248 P23396

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens RPS3 NP_000996 M.musculus Rps3 27050 Gene Info NP_036182 100
R.norvegicus Rps3 140654   NP_001009239 100
A.gambiae AgaP_AGAP001910 1281216   XP_321155 89
D.melanogaster RpS3 42761   NP_476632 84
A.thaliana AT2G31610 817719   NP_180719 82
A.thaliana AT3G53870 824554   NP_190955 82
C.elegans rps-3 175879   NP_498349 76
A.thaliana AT5G35530 833518   NP_198403 76
N.crassa NCU00489 3872321   XP_956174 75
S.pombe rps3 2539797   NP_596763 74
P.falciparum PF14_0627 812209   XP_001348801 70
S.cerevisiae RPS3 855543   NP_014221 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)