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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPLP0, ribosomal protein, large, P0
Sequence ID:NM_001002
NM_053275
Entrez Gene ID:6175
Ensembl ID:ENSG00000089157

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 120634507 - 120636497

 Exon Info From UCSC:
NM_001002
NM_053275

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2960918Full LengthBC000345ribosomal protein, large, P0
2960918Full LengthBC005863ribosomal protein, large, P0
2964581Full LengthBC000752ribosomal protein, large, P0
2964581Full LengthBC001834ribosomal protein, large, P0
2987976Full LengthBC001127ribosomal protein, large, P0
3458803Full LengthBC008092ribosomal protein, large, P0
3463159Full LengthBC008594ribosomal protein, large, P0
3507437Full LengthBC000087ribosomal protein, large, P0
3541947Full LengthBC003655ribosomal protein, large, P0
3903073Full LengthBC015173ribosomal protein, large, P0
3940316Full LengthBC009867ribosomal protein, large, P0
4660892Full LengthBC015690ribosomal protein, large, P0
6457312Full LengthBC070194ribosomal protein, large, P0
6736210Full LengthBC107717ribosomal protein, large, P0
4667742IncompleteBC104645ribosomal protein, large, P0

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444505  NP_000993  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002 NP_000993 P05388 Ribosomal_60s
Ribosomal_L10
NM_053275 NP_444505 P05388 Ribosomal_60s
Ribosomal_L10

Related Sequences

 
mRNAGenPeptSwissProt
M17885 AAA36470 P05388
BC000087 AAH00087 P05388
BC000345 AAH00345 P05388
BC000752 AAH00752 P05388
BC001127 AAH01127 P05388
BC001834 AAH01834 P05388
BC003655 AAH03655 P05388
BC005863 AAH05863 P05388
BC008092 AAH08092 P05388
BC008594 AAH08594 P05388
BC009867 AAH09867 P05388
BC015173 AAH15173 P05388
BC015690 AAH15690 P05388
BC070194 AAH70194 Q6NSF2
BC104645 AAI04646 Q3MHV2
BC107717 AAI07718 Q3B7A4
AF274958 AAK07533 Q9BZT1
DQ891813 ABM82739  
DQ894996 ABM85922  
D28418 BAA05784  
AK222468 BAD96188 Q53HW2
AK222571 BAD96291 Q53HK9
AK291109 BAF83798 A8K4Z4
AK304674 BAG65447 B4E3D5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPLP0 NP_000993 R.norvegicus Rplp0 64205   NP_071797 98
M.musculus Gm8730 667618   XP_996602 97
M.musculus Rplp0 11837 Gene Info NP_031501 97
A.gambiae AgaP_AGAP003592 1274256   XP_313349 73
C.elegans rpa-0 172943   NP_492766 68
D.melanogaster RpLP0 40451   NP_524211 66
N.crassa NCU07408 3874330   XP_958183 57
A.thaliana AT3G11250 820296   NP_187734 56
S.cerevisiae RPP0 851052   NP_013444 56
S.pombe rpp0 2538893   NP_588393 56
A.thaliana AT3G09200 820076   NP_187531 55
A.thaliana AT2G40010 818589   NP_181530 53
P.falciparum PF11_0313 810860   XP_001347984 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)