Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCBP2, Poly(rC) binding protein 2
Sequence ID:NM_005016
NM_001128911
NM_031989
NM_001128912
NM_001128913
NM_001098620
NM_001128914
Entrez Gene ID:5094
Ensembl ID:ENSG00000197111

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.12-q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53845885 - 53873610

 Exon Info From UCSC:
NM_005016
NM_001128911
NM_031989
NM_001128912
NM_001128913
NM_001098620
NM_001128914

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3356341Full LengthBC001155poly(rC) binding protein 2
5395926Full LengthBC107688poly(rC) binding protein 2
6424433Full LengthBC071942poly(rC) binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114366  NP_005007  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098620 NP_001092090    
NM_001128911 NP_001122383    
NM_001128912 NP_001122384    
NM_001128913 NP_001122385    
NM_001128914 NP_001122386    
NM_005016 NP_005007   KH_1
NM_031989 NP_114366   KH_1

Related Sequences

 
mRNAGenPeptSwissProt
BC001155 AAH01155 Q15366
BC071942 AAH71942 Q15366
BC107688 AAI07689 Q15366
AB188306 BAD36897 Q15366
AB208825 BAD92062 Q59HD4
AK292141 BAF84830 Q15366
AK299210 BAG61249 B4DRD7
AK302067 BAG63457 B4DXP5
X78136 CAA55015 Q15366

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCBP2 NP_005007 M.musculus Pcbp2 18521 Gene Info NP_001096635 100
R.norvegicus Pcbp2 363005   NP_001013241 100
N.crassa NCU09237 3879963   XP_963814 38
S.cerevisiae PBP2 852533   NP_009792 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)