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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NKX6-1, NK6 homeobox 1
Sequence ID:NM_006168
Entrez Gene ID:4825
Ensembl ID:ENSG00000163623

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_006168 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12678541443585414701
2684408541682485416996
44111168541871185419386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063966Full LengthBC160030NK6 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006159  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006168 NP_006159 P78426 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC160030 AAI60030  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NKX6-1 NP_006159 M.musculus Nkx6-1 18096 Gene Info NP_659204 97
R.norvegicus Nkx6-1 65193   NP_113925 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)