Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC4A4, solute carrier family 4, sodium bicarbonate cotransporter, member 4
Sequence ID:NM_001098484
NM_001134742
NM_003759
RefSeqGene ID:NG_012653
Entrez Gene ID:8671
Ensembl ID:ENSG00000080493

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 72102290 - 72433733

 Exon Info From UCSC:
NM_001098484
NM_001134742
NM_003759

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4610968Full LengthBC030977solute carrier family 4, sodium bicarbonate cotransporter, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003750  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098484 NP_001091954 Q9Y6R1  
NM_001134742 NP_001128214    
NM_003759 NP_003750   HCO3_cotransp
Band_3_cyto

Related Sequences

 
mRNAGenPeptSwissProt
AF011390 AAC39840 Q9Y6R1
AF007216 AAC51645 Q9Y6R1
AF004813 AAD31379 Q9Y6R3
AF069510 AAD42020 Q9Y6R1
AF053753 AAF21718 Q9Y6R1
AF053754 AAF21719 Q9Y6R1
AF157492 AAF80343 Q9Y6R1
AF310248 AAG47773 Q9Y6R1
BC030977 AAH30977 Q9Y6R1
EF531618 ABQ43327 A5JJ20
AB470072 BAH58226 Q9Y6R1
CR749482 CAH18310 Q68DB0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC4A4 NP_001091954 R.norvegicus Slc4a4 84484   NP_445876 97
M.musculus Slc4a4 54403 Gene Info NP_061230 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)