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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GCAT, glycine C-acetyltransferase
Sequence ID:NM_001171690
NM_014291
Entrez Gene ID:23464
Ensembl ID:ENSG00000100116

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38203971 - 38212904

 Exon Info From UCSC:
NM_001171690
NM_014291

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4859130Full LengthBC014457glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055106  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001171690 NP_001165161      
NM_014291 NP_055106 O75600 EC 2.3.1.29 Aminotran_1_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF077740 AAC27720 O75600 EC 2.3.1.29
BC014457 AAH14457 O75600 EC 2.3.1.29
AK123190 BAC85552 Q6ZWF1  
AK290093 BAF82782 A8K228  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GCAT NP_001165161 R.norvegicus Gcat 366959   NP_001019448 91
M.musculus Gcat 26912 Gene Info NP_038875 91
A.gambiae AgaP_AGAP005781 1276450   XP_315797 67
D.melanogaster CG10361 39333   NP_648509 67
C.elegans T25B9.1 177968   NP_501991 65
A.thaliana BIOF 830339   NP_974731 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)