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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PDE6H, phosphodiesterase 6H, cGMP-specific, cone, gamma
Sequence ID:NM_006205
RefSeqGene ID:NG_016859
Entrez Gene ID:5149
Ensembl ID:ENSG00000139053

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ACHROMATOPSIA 6 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 15130905 - 15134772

NM_006205 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1651512595515126019
662401513090515131079
2412811513211215132152
2827451513433315134796

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262475Full LengthBC069774phosphodiesterase 6H, cGMP-specific, cone, gamma
7262487Full LengthBC069800phosphodiesterase 6H, cGMP-specific, cone, gamma
7939583Full LengthBC093738phosphodiesterase 6H, cGMP-specific, cone, gamma
7939585Full LengthBC093740phosphodiesterase 6H, cGMP-specific, cone, gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006196  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006205 NP_006196 Q13956 EC 3.1.4.35 PDE6_gamma

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC069774 AAH69774 Q13956 EC 3.1.4.35
BC069800 AAH69800 Q13956 EC 3.1.4.35
BC093738 AAH93738 Q13956 EC 3.1.4.35
BC093740 AAH93740 Q13956 EC 3.1.4.35
HQ448407 ADQ32887    
D45399 BAA08241 Q13956 EC 3.1.4.35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDE6H NP_006196 M.musculus Pde6h 78600 Gene Info NP_076387 92
R.norvegicus Pde6h 114248   NP_446140 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)