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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCL11, Chemokine (C-C motif) ligand 11
Sequence ID:NM_002986
RefSeqGene ID:NG_012212
Entrez Gene ID:6356
Ensembl ID:ENSG00000172156

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AIDS, RAPID PROGRESSION TOCCL2
CCL3
CCL3L1
CD209
CX3CR1
CXCL12
CXCR1
HLA-C
HLA-C
HLA-C
IFNG
IL10
IL4R
IL4R
KIR3DL1
ASTHMAADRB2
ALOX5
HLA-G
HNMT
IL12B
IL13
MUC7
PHF11
PLA2G7
SCGB1A1
SCGB3A2
TNF

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.1-q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 32612760 - 32614732

NM_002986 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12173261268632612902
2183293261411432614225
3309253261460332615198

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4618679Full LengthBC017850chemokine (C-C motif) ligand 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002977  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002986 NP_002977 Q6I9T4
P51671
IL8

Related Sequences

 
mRNAGenPeptSwissProt
U46573 AAA98957 Q6I9T4
P51671
BC017850 AAH17850 Q6I9T4
P51671
DQ891969 ABM82895  
DQ895158 ABM86084  
D49372 BAA08370 Q6I9T4
P51671
Z69291 CAA93258 P51671
Z75668 CAA99997 P51671
Z75669 CAA99998 P51671
CR457421 CAG33702 Q6I9T4
P51671

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL11 NP_002977 R.norvegicus Ccl11 29397   NP_062078 61
M.musculus Ccl11 20292 Gene Info NP_035460 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta